Protein ZmSRS9 | |
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Information | |
TF Name: | ZmSRS9 |
Species: | Maize |
TF Family: | SHI/STY (SRS) |
Gene Name(Synonym): | LRP1 |
Uniprot ID: | K7W1D3 |
Subgenome: | 2 |
ZmSRS9 is a protein in the SHI/STY (SRS) family.
Overview of domains present in v5 transcripts | |
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PF05142 | |
Zm00001eb362740_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d011843 | DAPseq | sequence | fimo | position | |
Zm00001d011843 | DAPseq | sequence | fimo | position | |
Zm00001d011843 | ChIPseq | sequence | fimo | position | |
Zm00001d011843 | PChIPseq | sequence | fimo | position |
MNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQPPPPSS
PAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKSTWVPAAR
RRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDSLPRQVR
APAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGSGAGTGT
SMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
MNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQPPPPSS
PAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKSTWVPAAR
RRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDSLPRQVR
APAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGSGAGTGT
SMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
MNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQPPPPSS
PAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKSTWVPAAR
RRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDSLPRQVR
APAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGSGAGTGT
SMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
MNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQPPPPSS
PAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKSTWVPAAR
RRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDSLPRQVR
APAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGSGAGTGT
SMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
MNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQPPPPSS
PAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKSTWVPAAR
RRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDSLPRQVR
APAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGSGAGTGT
SMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF05142 |
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Hover here to show all domains |
CATGAACTACGGGATGGCCGACGTG...
CATGAACTACGGGATGGCCGACGTGGGGATGGTCGTCGTCGCGCCCGCCGCCTCCTTCCACCACACGCACCACCACCACCACCACCACGAGGCCGCCGCCGCCGCCGCCGCGGCTGCGGCGGCCTCCGGCGACCCCATCTTCCCGCTGCTCTCCGGCGGCCCCTGCGTGCTTGATCCGGACAAGTCGGCCTCCGCCAGCGCCATCCAGTTCTGGCAGCAGCAGCCTCCGCCGCCGTCGTCGCCGGCTGCTGCAGCGGGCGCTAACCCTAACCCTAGCGCCAGCCCCTTCGCCTACCTCAAGAAGCCCCTCCCGATGCTGGACGCCGGCGCCGGCTCCTCAGGCTCCGGCGCCACCACGTGCCAGGACTGCGGCAACCAAGCGAAGAAGGACTGCGGCCACAACCGGTGCCGCACCTGCTGCAAGAGCCGCGGCTTCGACTGCAACACGCACGTCAAGAGCACCTGGGTCCCCGCCGCCCGCCGCCGCGAGCGCCAGCAGCTCGCCGCCTCCGGCTCCGCCTCGTCCTCCCCCGCCACCGCCTCCGCGGCGGCCGTCGCCGCGTCCGCGTCCGCGTCCGCGTCCAAGAAGCCCCGCCTCCTCTCGTCGCAGACCACCACCTCGCACACGTCCACCTCCAACGCCACGACGCCCCGAAGCTTCGACACCACGTCCAGCCACCAAGACGCGTCGTTCAGGGACAGCCTCCCGAGGCAGGTGCGCGCGCCGGCGGTGTTCAAGTGCGTGCGCGTGACGTCCATCGAGGACGGCGAGGACGAGTACGCGTACCAGGCGACGGTCACCATCAACGGCCACCTCTTCAAGGGGTTCCTGTACGACCAGGGCCCCGACGACGGGCGCCACGCGGCCACCAGCAACGACGACTGCACGGCCGGCGGGGTGCCCAACATCTCCGAGCTCCATCTCGGAGCGGCGTCTGGTTCCGGCGCCGGCACCGGCACCTCGATGTCGATGGCTCCTCCCACGGGGCTGTACGGTGGCGGTGGCGGAGGACATCATCCGCACATTCTCGGCGGGTCGTCGAGCTACGGTAACACCATGAACTGATGGAGTACGTTCCTTCCTTGTACACCGGAAGAGTCCCGGCCCGTTAATTTCCATTCCTTGTTGCTCTTCATTTTCCACGCTATAGTAGCAGAGTTCAATTTTCTCAGCCTTGTCACTCACCCGGCGCCATAGATAGCAGGGCATCAATGCATGGTGTTATTCTGTTCTACCTCCTTCATTCCATCGTCCTACTGTGTTATTTAGCCATTCGTTGGTGTATAATAACATCGATGAGTTGTTTTTTCTTCTTCTTCCAGTTGTTCTACTGCTATAGCAAGTACTGCACTGCTAGTTCTTTT
MRQAAAMNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQ
PPPPSSPAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKST
WVPAARRRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQDASFRDS
LPRQVRAPAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDGRHAATSNDDCTAGGVPNISELHLGAASGS
GAGTGTSMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
AGCTCCCCACTCTCTCTCCGCTGCT...
AGCTCCCCACTCTCTCTCCGCTGCTGCCTCCGCGGACGGATTCCATCCCCGGCCCTATAAGTGTGGCTTCGGGACGGCGCTTCCCATCCGACACCGGCGCCTTCGCGGACTGGGTCGCCTCCTCCGCCGCCGCGGCGCGCGGGGACGACCTCTCCCTCGGCTTCAATGCCAGCGCGGCGGCCGCCGCGGCCGCGGCCGCCTCCGGCGCCTCGCTGGGCGCGGGCCTCTGGGGCCCGGCGTCCTCCGCCTCCGCCGCCATGCGCCAGGCGGCCGCCATGAACTACGGGATGGCCGACGTGGGGATGGTCGTCGTCGCGCCCGCCGCCTCCTTCCACCACACGCACCACCACCACCACCACCACGAGGCCGCCGCCGCCGCCGCCGCGGCTGCGGCGGCCTCCGGCGACCCCATCTTCCCGCTGCTCTCCGGCGGCCCCTGCGTGCTTGATCCGGACAAGTCGGCCTCCGCCAGCGCCATCCAGTTCTGGCAGCAGCAGCCTCCGCCGCCGTCGTCGCCGGCTGCTGCAGCGGGCGCTAACCCTAACCCTAGCGCCAGCCCCTTCGCCTACCTCAAGAAGCCCCTCCCGATGCTGGACGCCGGCGCCGGCTCCTCAGGCTCCGGCGCCACCACGTGCCAGGACTGCGGCAACCAAGCGAAGAAGGACTGCGGCCACAACCGGTGCCGCACCTGCTGCAAGAGCCGCGGCTTCGACTGCAACACGCACGTCAAGAGCACCTGGGTCCCCGCCGCCCGCCGCCGCGAGCGCCAGCAGCTCGCCGCCTCCGGCTCCGCCTCGTCCTCCCCCGCCACCGCCTCCGCGGCGGCCGTCGCCGCGTCCGCGTCCGCGTCCGCGTCCAAGAAGCCCCGCCTCCTCTCGTCGCAGACCACCACCTCGCACACGTCCACCTCCAACGCCACGACGCCCCGAAGCTTCGACACCACGTCCAGCCACCAAGACGCGTCGTTCAGGGACAGCCTCCCGAGGCAGGTGCGCGCGCCGGCGGTGTTCAAGTGCGTGCGCGTGACGTCCATCGAGGACGGCGAGGACGAGTACGCGTACCAGGCGACGGTCACCATCAACGGCCACCTCTTCAAGGGGTTCCTGTACGACCAGGGCCCCGACGACGGGCGCCACGCGGCCACCAGCAACGACGACTGCACGGCCGGCGGGGTGCCCAACATCTCCGAGCTCCATCTCGGAGCGGCGTCTGGTTCCGGCGCCGGCACCGGCACCTCGATGTCGATGGCTCCTCCCACGGGGCTGTACGGTGGCGGTGGCGGAGGACATCATCCGCACATTCTCGGCGGGTCGTCGAGCTACGGTAACACCATGAACTGATGGAGTACGTTCCTTCCTTGTACACCGGAAGAGTCCCGGCCCGTTAATTTCCATTCCTTGTTGCTCTTCATTTTCCACGCTATAGTAGCAGAGTTCAATTTTCTCAGCCTTGTCACTCACCCGGCGCCATAGATAGCAGGGCATCAATGCATGGTGTTATTCTGTTCTACCTCCTTCATTCCATCGTCCTACTGTGTTATTTAGCCATTCGTTGGTGTATAATAACATCGATGAGTTGTTTTTTCTTCTTCTTCCAGTTGTTCTACTGCTATAGCAAGTACTGCACTGCTAGTTCTTTTCCCCCCTATCACACTAGTTGGGTACGTACGTAGAGAGGAGAATAATTGTTAGTAGGAATTGGGAAGAAGATACTCTCGGTAGTGCAAAGATTAAATTTTTTACCATTGTGCATAAGATATCGCCTGCTAGCTGGTTCCCAATGCCTG
MRQAAAMNYGMADVGMVVVAPAASFHHTHHHHHHHEAAAAAAAAAAASGDPIFPLLSGGPCVLDPDKSASASAIQFWQQQ
PPPPSSPAAAAGANPNPSASPFAYLKKPLPMLDAGAGSSGSGATTCQDCGNQAKKDCGHNRCRTCCKSRGFDCNTHVKST
WVPAARRRERQQLAASGSASSSPATASAAAVAASASASASKKPRLLSSQTTTSHTSTSNATTPRSFDTTSSHQGTSYPPF
TEQHHAVHGRILPTQTVSRRAADASFRDSLPRQVRAPAVFKCVRVTSIEDGEDEYAYQATVTINGHLFKGFLYDQGPDDG
RHAATSNDDCTAGGVPNISELHLGAASGSGAGTGTSMSMAPPTGLYGGGGGGHHPHILGGSSSYGNTMN
ATGCGCCAGGCGGCCGCCATGAACT...
ATGCGCCAGGCGGCCGCCATGAACTACGGGATGGCCGACGTGGGGATGGTCGTCGTCGCGCCCGCCGCCTCCTTCCACCACACGCACCACCACCACCACCACCACGAGGCCGCCGCCGCCGCCGCCGCGGCTGCGGCGGCCTCCGGCGACCCCATCTTCCCGCTGCTCTCCGGCGGCCCCTGCGTGCTTGATCCGGACAAGTCGGCCTCCGCCAGCGCCATCCAGTTCTGGCAGCAGCAGCCTCCGCCGCCGTCGTCGCCGGCTGCTGCAGCGGGCGCTAACCCTAACCCTAGCGCCAGCCCCTTCGCCTACCTCAAGAAGCCCCTCCCGATGCTGGACGCCGGCGCCGGCTCCTCAGGCTCCGGCGCCACCACGTGCCAGGACTGCGGCAACCAAGCGAAGAAGGACTGCGGCCACAACCGGTGCCGCACCTGCTGCAAGAGCCGCGGCTTCGACTGCAACACGCACGTCAAGAGCACCTGGGTCCCCGCCGCCCGCCGCCGCGAGCGCCAGCAGCTCGCCGCCTCCGGCTCCGCCTCGTCCTCCCCCGCCACCGCCTCCGCGGCGGCCGTCGCCGCGTCCGCGTCCGCGTCCGCGTCCAAGAAGCCCCGCCTCCTCTCGTCGCAGACCACCACCTCGCACACGTCCACCTCCAACGCCACGACGCCCCGAAGCTTCGACACCACGTCCAGCCACCAAGGTACGTCCTACCCGCCATTTACCGAGCAGCATCACGCCGTCCACGGTCGGATCCTTCCCACCCAAACCGTGTCTCGTCGCGCTGCAGACGCGTCGTTCAGGGACAGCCTCCCGAGGCAGGTGCGCGCGCCGGCGGTGTTCAAGTGCGTGCGCGTGACGTCCATCGAGGACGGCGAGGACGAGTACGCGTACCAGGCGACGGTCACCATCAACGGCCACCTCTTCAAGGGGTTCCTGTACGACCAGGGCCCCGACGACGGGCGCCACGCGGCCACCAGCAACGACGACTGCACGGCCGGCGGGGTGCCCAACATCTCCGAGCTCCATCTCGGAGCGGCGTCTGGTTCCGGCGCCGGCACCGGCACCTCGATGTCGATGGCTCCTCCCACGGGGCTGTACGGTGGCGGTGGCGGAGGACATCATCCGCACATTCTCGGCGGGTCGTCGAGCTACGGTAACACCATGAACTGA
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